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Jul 16
2010
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Genome-wide association studies have previously shown a strong signal between a region residing on chromosome 22 centered on MYH9 and African Americans with FSGS and hypertension attributed end-stage kidney disease (H-ESKD). On July 15, 2010, Science released online a publication revealing a strong association between the same but expanded interval containing a nearby gene encoding for apolipoprotein L-1 (APOL1) in a similar group of patients.
The investigators, led by Dr. Martin Pollak, the chief of the Division of Nephrology at Boston's Beth Israel Deaconess Medical Center, reasoned that because no causal mutations have been identified in MYH9, other alleles ought to be considered. Furthermore, recent selection pressures in Africans could lead to longer patterns of linkage disequilibrium (LD). More, but previously unavailable, data from African individuals whose DNA were sequenced in the 1000 Genomes Project (www.1000genomes.org) was used to identify polymorphisms that showed large frequency differences between Africans and Europeans.
An initial association analysis was done comparing 205 African-American sporadic cases with biopsy proven FSGS to 180 African-American controls. The strongest signals were found in the last exon of APOL1. More specifically, two closely spaced alleles that are in perfect LD (i.e. no recombination events) showed the strongest association. This two-allele haplotype termed “G1” consisted of the non-synonymous coding variants rs73885319 (S342G) and rs60910145 (I384M). Logistic regression analysis to control for G1 led to the identification of a second strong association with a 6 base pair deletion in APOL1 termed G2.

This week in the New England Journal of Medicine, 2 studies reported on the use of mTor inhibitors in Autosomal Dominant Polycystic Kidney Disease (ADPKD). The results were mixed but overall, disappointing.
In the
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atemia has been been linked to poor patient outcomes, including a link to higher mortality. This relationship has been inferred by several retrospective and observational studies. In fact, the relationship between hyperphosphatemia and death is one of the most consistently espoused theories in all of nephrology. There is just problem however; there has never been a randomized trial to confirm this association.
In a fascinating article from November's